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1.
Mol Cell Proteomics ; 22(8): 100617, 2023 08.
Artigo em Inglês | MEDLINE | ID: mdl-37453717

RESUMO

Chondroitin sulfate proteoglycans (CSPGs) control key events in human health and disease and are composed of chondroitin sulfate (CS) polysaccharide(s) attached to different core proteins. Detailed information on the biological effects of site-specific CS structures is scarce as the polysaccharides are typically released from their core proteins prior to analysis. Here we present a novel glycoproteomic approach for site-specific sequencing of CS modifications from human urine. Software-assisted and manual analysis revealed that certain core proteins carried CS with abundant sulfate modifications, while others carried CS with lower levels of sulfation. Inspection of the amino acid sequences surrounding the attachment sites indicated that the acidity of the attachment site motifs increased the levels of CS sulfation, and statistical analysis confirmed this relationship. However, not only the acidity but also the sequence and characteristics of specific amino acids in the proximity of the serine glycosylation site correlated with the degree of sulfation. These results demonstrate attachment site-specific characteristics of CS polysaccharides of CSPGs in human urine and indicate that this novel method may assist in elucidating the biosynthesis and functional roles of CSPGs in cellular physiology.


Assuntos
Proteoglicanas de Sulfatos de Condroitina , Sulfatos de Condroitina , Humanos , Sulfatos de Condroitina/química , Proteoglicanas de Sulfatos de Condroitina/química , Proteoglicanas de Sulfatos de Condroitina/metabolismo , Polissacarídeos , Sequência de Aminoácidos
2.
Elife ; 112022 05 23.
Artigo em Inglês | MEDLINE | ID: mdl-35604022

RESUMO

Sympathetic denervation of the heart following ischemia/reperfusion induced myocardial infarction (MI) is sustained by chondroitin sulfate proteoglycans (CSPGs) in the cardiac scar. Denervation predicts risk of sudden cardiac death in humans. Blocking CSPG signaling restores sympathetic axon outgrowth into the cardiac scar, decreasing arrhythmia susceptibility. Axon growth inhibition by CSPGs can depend on the sulfation status of the glycosaminoglycan (CS-GAG) side chains. Tandem sulfation of CS-GAGs at the 4th (4S) and 6th (6S) positions of n-acetyl-galactosamine inhibits outgrowth in several types of central neurons, but we don't know if sulfation is similarly critical during peripheral nerve regeneration. We asked if CSPG sulfation prevented sympathetic axon outgrowth after MI. Reducing 4S with the 4-sulfatase enzyme Arylsulfatase-B (ARSB) enhanced outgrowth of dissociated rat sympathetic neurons over CSPGs. Likewise, reducing 4S with ARSB restored axon outgrowth from mouse sympathetic ganglia co-cultured with cardiac scar tissue. We quantified enzymes responsible for adding and removing sulfation, and found that CHST15 (4S dependent 6-sulfotransferase) was upregulated, and ARSB was downregulated after MI. This suggests a mechanism for production and maintenance of sulfated CSPGs in the cardiac scar. We decreased 4S,6S CS-GAGs in vivo by transient siRNA knockdown of Chst15 after MI, and found that reducing 4S,6S restored tyrosine hydroxylase (TH) positive sympathetic nerve fibers in the cardiac scar. Reinnervation reduced isoproterenol induced arrhythmias. Our results suggest that modulating CSPG-sulfation after MI may be a therapeutic target to promote sympathetic nerve regeneration in the cardiac scar and reduce post-MI cardiac arrhythmias.


Assuntos
Infarto do Miocárdio , N-Acetilgalactosamina-4-Sulfatase , Enxofre/metabolismo , Animais , Antígenos , Proteoglicanas de Sulfatos de Condroitina/química , Cicatriz , Camundongos , Regeneração Nervosa/fisiologia , Proteoglicanas , Ratos
3.
Cell Death Dis ; 12(8): 765, 2021 08 03.
Artigo em Inglês | MEDLINE | ID: mdl-34344877

RESUMO

Neurofibromatosis type 1 (NF1), an autosomal dominant and multisystem disorder, is generally considered to be caused by NF1 inactivation. However, there are also numerous studies showing that Neurofibromatosis type 1-like phenotype can be caused by the abnormalities in the other genes. Through targeted parallel sequencing, whole-exome sequencing, de novo genomic sequencing, and RNA isoform sequencing, we identified a germline V2097M variation in CSPG4 gene probably increased susceptibility to a NF1-like phenotype family. Besides, a series of in vitro functional studies revealed that this variant promoted cell proliferation by activating the MAPK/ERK signaling pathway via hindering ectodomain cleavage of CSPG4. Our data demonstrate that a germline variation in the CSPG4 gene might be a high risk to cause NF1-like phenotype. To our knowledge, this is the first report of mutations in the CSPG4 gene in human diseases.


Assuntos
Proteoglicanas de Sulfatos de Condroitina/genética , Células Germinativas/metabolismo , Proteínas de Membrana/genética , Mutação/genética , Neurofibromatose 1/genética , Neurofibromatose 1/patologia , Adulto , Sequência de Aminoácidos , Linhagem Celular Tumoral , Proliferação de Células/genética , Pré-Escolar , Proteoglicanas de Sulfatos de Condroitina/química , Família , Feminino , Predisposição Genética para Doença , Humanos , Lactente , Sistema de Sinalização das MAP Quinases , Masculino , Proteínas de Membrana/química , Pessoa de Meia-Idade , Modelos Biológicos , Neurofibromatose 1/diagnóstico por imagem , Linhagem , Fenótipo , Adulto Jovem
4.
Glycobiology ; 30(12): 989-1002, 2020 12 09.
Artigo em Inglês | MEDLINE | ID: mdl-32337544

RESUMO

Chondroitin sulfate (CS) is the placental receptor for the VAR2CSA malaria protein, expressed at the surface of infected erythrocytes during Plasmodium falciparum infection. Infected cells adhere to syncytiotrophoblasts or get trapped within the intervillous space by binding to a determinant in a 4-O-sulfated CS chains. However, the exact structure of these glycan sequences remains unclear. VAR2CSA-reactive CS is also expressed by tumor cells, making it an attractive target for cancer diagnosis and therapeutics. The identities of the proteoglycans carrying these modifications in placental and cancer tissues remain poorly characterized. This information is clinically relevant since presentation of the glycan chains may be mediated by novel core proteins or by a limited subset of established proteoglycans. To address this question, VAR2CSA-binding proteoglycans were affinity-purified from the human placenta, tumor tissues and cancer cells and analyzed through a specialized glycoproteomics workflow. We show that VAR2CSA-reactive CS chains associate with a heterogenous group of proteoglycans, including novel core proteins. Additionally, this work demonstrates how affinity purification in combination with glycoproteomics analysis can facilitate the characterization of CSPGs with distinct CS epitopes. A similar workflow can be applied to investigate the interaction of CSPGs with other CS binding lectins as well.


Assuntos
Antígenos de Protozoários/metabolismo , Proteoglicanas de Sulfatos de Condroitina/metabolismo , Placenta/metabolismo , Proteômica , Neoplasias da Bexiga Urinária/metabolismo , Antígenos de Protozoários/química , Proteoglicanas de Sulfatos de Condroitina/química , Cromatografia de Afinidade , Feminino , Humanos , Placenta/química , Gravidez , Neoplasias da Bexiga Urinária/patologia
5.
Cells ; 8(4)2019 04 09.
Artigo em Inglês | MEDLINE | ID: mdl-30970625

RESUMO

Dermatopontin (DPT) is an extensively distributed non-collagenous component of the extracellular matrix predominantly found in the dermis of the skin, and consequently expressed in several tissues. In this study, we explored the role of DPT in myogenesis and perceived that it enhances the cell adhesion, reduces the cell proliferation and promotes the myoblast differentiation in C2C12 cells. Our results reveal an inhibitory effect with fibronectin (FN) in myoblast differentiation. We also observed that DPT and fibromodulin (FMOD) regulate positively to each other and promote myogenic differentiation. We further predicted the 3D structure of DPT, which is as yet unknown, and validated it using state-of-the-art in silico tools. Furthermore, we explored the in-silico protein-protein interaction between DPT-FMOD, DPT-FN, and FMOD-FN, and perceived that the interaction between FMOD-FN is more robust than DPT-FMOD and DPT-FN. Taken together, our findings have determined the role of DPT at different stages of the myogenic process.


Assuntos
Proteoglicanas de Sulfatos de Condroitina , Proteínas da Matriz Extracelular , Fibromodulina , Fibronectinas , Desenvolvimento Muscular/fisiologia , Músculo Esquelético/metabolismo , Animais , Adesão Celular/fisiologia , Diferenciação Celular/fisiologia , Linhagem Celular , Proliferação de Células/fisiologia , Proteoglicanas de Sulfatos de Condroitina/química , Proteoglicanas de Sulfatos de Condroitina/fisiologia , Proteínas da Matriz Extracelular/química , Proteínas da Matriz Extracelular/fisiologia , Fibromodulina/química , Fibromodulina/metabolismo , Fibronectinas/química , Fibronectinas/metabolismo , Camundongos , Ligação Proteica
6.
Spectrochim Acta A Mol Biomol Spectrosc ; 210: 148-158, 2019 Mar 05.
Artigo em Inglês | MEDLINE | ID: mdl-30453190

RESUMO

Confocal Raman microspectral imaging (CRMI) in combination with multivariate analysis was used to study pathological progression after spinal cord injury (SCI). By establishing moderate contusion in rat models, ex vivo longitudinal spinal cord tissue sections were prepared for microspectroscopic analysis. Comparative studies were then performed to determine the pathological distinctions among before injury (BI), one day post-injury (1 DPI), seven days post-injury (7 DPI), and 14 days post-injury (14 DPI) groups. Multivariate analysis algorithms, including K-mean cluster analysis (KCA) and principal component analysis (PCA), were conducted to highlight biochemical and structural variations after tissue damage. It is confirmed that typical spectral features and profiles can illustrate some fundamental and significant pathological processes post-injury, such as neuron apoptosis, hemorrhage, demyelination, and chondroitin sulfate proteoglycans (CSPGs) upregulation. Further, by establishing spectra-structure correlations, the reconstructed spectral images revealed some minute and important morphological characteristics following tissue injury, such as glial scar formation surrounding the cavity structure. The observed spectral phenomena also provide a detailed view on relevant pathobiological factors, which are involved in the spread of secondary damage after traumatic spinal cord injury. Our findings not only provide a spectral perspective to the well-known cellular mechanisms underlying SCI, but further provide a sound basis for developing real-time Raman methodologies to evaluate the prognostic factors and therapeutic results of SCI.


Assuntos
Análise Espectral Raman/métodos , Traumatismos da Medula Espinal/diagnóstico por imagem , Medula Espinal/química , Animais , Proteoglicanas de Sulfatos de Condroitina/química , Análise por Conglomerados , Feminino , Hemoglobinas/química , Processamento de Imagem Assistida por Computador/métodos , Lipídeos/química , Análise Multivariada , Análise de Componente Principal , Ratos Sprague-Dawley , Medula Espinal/patologia , Traumatismos da Medula Espinal/patologia , Fatores de Tempo
7.
FASEB J ; 33(3): 3112-3128, 2019 03.
Artigo em Inglês | MEDLINE | ID: mdl-30550356

RESUMO

The chondroitin sulfate proteoglycan 4 ( CSPG4) gene encodes a transmembrane proteoglycan (PG) constituting the largest and most structurally complex macromolecule of the human surfaceome. Its transcript shows an extensive evolutionary conservation and, due to the elaborated intracellular processing of the translated protein, it generates an array of glycoforms with the potential to exert variant-specific functions. CSPG4-mediated molecular events are articulated through the interaction with more than 40 putative ligands and the concurrent involvement of the ectodomain and cytoplasmic tail. Alternating inside-out and outside-in signal transductions may thereby be elicited through a tight functional connection of the PG with the cytoskeleton and its regulators. The potential of CSPG4 to influence both types of signaling mechanisms is also asserted by its lateral mobility along the plasma membrane and its intersection with microdomain-restricted internalization and endocytic trafficking. Owing to the multitude of molecular interplays that CSPG4 may engage, and thanks to a differential phosphorylation of its intracellular domain accounted by crosstalking signaling pathways, the PG stands out for its unique capability to affect numerous cellular phenomena, including those purporting pathologic conditions. We discuss here the progresses made in advancing our understanding about the structural-functional bases for the ability of CSPG4 to widely impact on cell behavior, such as to highlight how its multivalency may be exploited to interfere with disease progression.-Tamburini, E., Dallatomasina, A., Quartararo, J., Cortelazzi, B., Mangieri, D., Lazzaretti, M., Perris, R. Structural deciphering of the NG2/CSPG4 proteoglycan multifunctionality.


Assuntos
Antígenos/química , Proteoglicanas/química , Sequência de Aminoácidos , Animais , Antígenos/genética , Antígenos/metabolismo , Membrana Celular/metabolismo , Proteoglicanas de Sulfatos de Condroitina/química , Proteoglicanas de Sulfatos de Condroitina/genética , Proteoglicanas de Sulfatos de Condroitina/metabolismo , Evolução Molecular , Humanos , Proteínas de Membrana/química , Proteínas de Membrana/genética , Proteínas de Membrana/metabolismo , Modelos Moleculares , Regeneração Nervosa/fisiologia , Neuritos/metabolismo , Filogenia , Domínios e Motivos de Interação entre Proteínas , Proteoglicanas/genética , Proteoglicanas/metabolismo
8.
Elife ; 72018 05 15.
Artigo em Inglês | MEDLINE | ID: mdl-29762123

RESUMO

The failure of mammalian CNS neurons to regenerate their axons derives from a combination of intrinsic deficits and extrinsic factors. Following injury, chondroitin sulfate proteoglycans (CSPGs) within the glial scar inhibit axonal regeneration, an action mediated by the sulfated glycosaminoglycan (GAG) chains of CSPGs, especially those with 4-sulfated (4S) sugars. Arylsulfatase B (ARSB) selectively cleaves 4S groups from the non-reducing ends of GAG chains without disrupting other, growth-permissive motifs. We demonstrate that ARSB is effective in reducing the inhibitory actions of CSPGs both in in vitro models of the glial scar and after optic nerve crush (ONC) in adult mice. ARSB is clinically approved for replacement therapy in patients with mucopolysaccharidosis VI and therefore represents an attractive candidate for translation to the human CNS.


Assuntos
Axônios/efeitos dos fármacos , Axônios/fisiologia , Proteoglicanas de Sulfatos de Condroitina/química , N-Acetilgalactosamina-4-Sulfatase/metabolismo , Traumatismos do Nervo Óptico/tratamento farmacológico , Regeneração/efeitos dos fármacos , Sulfatos/metabolismo , Animais , Células Cultivadas , Modelos Animais de Doenças , Humanos , Camundongos , N-Acetilgalactosamina-4-Sulfatase/administração & dosagem , Resultado do Tratamento
9.
Biochemistry ; 57(26): 3807-3816, 2018 07 03.
Artigo em Inglês | MEDLINE | ID: mdl-29812912

RESUMO

Fibroblast growth factor 1 (FGF1) binds to specific FGF receptors (FGFRs) at the surface of target cells to initiate intracellular signaling. While heparan sulfate proteoglycans (HSPGs) are well-described coreceptors, it is uncertain whether there are additional binding sites for FGF1 at the cell surface. To address this, we devised and tested a method to identify novel binding sites for FGF1 at the cell surface, which may also be applicable for other protein ligands. We constructed an APEX2-FGF1 fusion protein to perform proximal biotin labeling of proteins following binding of the fusion protein to the cell surface. After functional validation of the fusion protein by a signaling assay, we used this method to identify binding sites for FGF1 on cell surfaces of living cells. We confirmed the feasibility of our approach by detection of FGFR4, a well-known and specific receptor for FGF1. We subsequently screened for novel interactors using RPE1 cells and identified the proteoglycans CSPG4 (NG2) and CD44. We found that FGF1 binds CD44 through its heparin-binding moiety. Moreover, we found that FGF1 was colocalized with both CSPG4 and CD44 at the cell surface, suggesting that these receptors act as storage molecules that create a reservoir of FGF1. Importantly, our data demonstrate that recombinant ligand-APEX2 fusion proteins can be used to identify novel receptor interactions on the cell surface.


Assuntos
Proteoglicanas de Sulfatos de Condroitina/química , DNA Liase (Sítios Apurínicos ou Apirimidínicos)/química , Fator 1 de Crescimento de Fibroblastos/química , Receptores de Hialuronatos/química , Proteínas de Membrana/química , Proteínas Recombinantes de Fusão/química , Proteoglicanas de Sulfatos de Condroitina/metabolismo , DNA Liase (Sítios Apurínicos ou Apirimidínicos)/metabolismo , Endonucleases , Fator 1 de Crescimento de Fibroblastos/metabolismo , Humanos , Receptores de Hialuronatos/metabolismo , Proteínas de Membrana/metabolismo , Enzimas Multifuncionais , Proteínas Recombinantes de Fusão/metabolismo , Coloração e Rotulagem
10.
J Biochem ; 163(5): 399-412, 2018 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-29462330

RESUMO

Chondroitin sulphate proteoglycan 4 (CSPG4) is a cell surface proteoglycan highly expressed by tumour, perivascular and oligodendrocyte cells and known to be involved cell adhesion and migration. This study showed that CSPG4 was present as a proteoglycan on the cell surface of two melanoma cell lines, MM200 and Me1007, as well as shed into the conditioned medium. CSPG4 from the two melanoma cell lines differed in the amount of chondroitin sulphate (CS) decoration, as well as the way the protein core was fragmented. In contrast, the CSPG4 expressed by a colon carcinoma cell line, WiDr, was predominantly as a protein core on the cell surface lacking glycosaminoglycan (GAG) chains. This study demonstrated that CSPG4 immunopurified from the melanoma cell lines formed a complex with perlecan synthesized by the same cultured cells. Mechanistic studies showed that CSPG4 bound to perlecan via hydrophobic protein-protein interactions involving multiple sites on perlecan including the C-terminal region. Furthermore, this study revealed that CSPG4 interacted with perlecan to support cell adhesion and actin polymerization. Together these data suggest a novel mechanism by which CSPG4 expressing cells might attach to perlecan-rich matrices so as those found in connective tissues and basement membranes.


Assuntos
Adesão Celular , Proteoglicanas de Sulfatos de Condroitina/metabolismo , Proteoglicanas de Heparan Sulfato/metabolismo , Proteínas de Membrana/metabolismo , Sítios de Ligação , Proteoglicanas de Sulfatos de Condroitina/química , Proteoglicanas de Heparan Sulfato/química , Humanos , Proteínas de Membrana/química , Ligação Proteica , Células Tumorais Cultivadas
11.
J Biomol Struct Dyn ; 36(3): 679-688, 2018 02.
Artigo em Inglês | MEDLINE | ID: mdl-28278758

RESUMO

Chondroitin sulfate proteoglycans (CSPGs) are potent inhibitors of growth in the adult central nervous system. Use of the enzyme chondroitinase ABC I (ChABC I) as a strategy to reduce CSPG inhibition in experimental models of spinal cord injury has led to observations of its remarkable capacity for repair. More importantly, ChABC therapy has been demonstrated to promote significant recovery of function to spinal injured animals. Despite this incomparable function of ChABC I, its clinical application has been limited because of its thermal instability as reported in the literature. In a recent study by Nazari-Robati et al., thermal stability of ChABC I was improved by protein engineering using site-directed mutagenesis method. Here, in this study, molecular dynamics simulations were used to take a closer look into the phenomenon leading to the experimentally observed thermal stability improvement followed by the corresponding site-directed mutagenesis. We concluded that the mutations induce local flexibility along with a re-conformation into the native structure which consequently increase the protein thermal stability.


Assuntos
Condroitina ABC Liase/química , Proteoglicanas de Sulfatos de Condroitina/química , Estabilidade Enzimática , Traumatismos da Medula Espinal/enzimologia , Animais , Sistema Nervoso Central/efeitos dos fármacos , Condroitina ABC Liase/genética , Proteoglicanas de Sulfatos de Condroitina/biossíntese , Modelos Animais de Doenças , Humanos , Simulação de Dinâmica Molecular , Mutagênese Sítio-Dirigida , Traumatismos da Medula Espinal/tratamento farmacológico , Traumatismos da Medula Espinal/metabolismo , Traumatismos da Medula Espinal/patologia , Temperatura
12.
J Biol Chem ; 293(1): 379-389, 2018 01 05.
Artigo em Inglês | MEDLINE | ID: mdl-29138239

RESUMO

Chondroitin sulfate proteoglycans (CSPGs) are important structural components of connective tissues in essentially all metazoan organisms. In vertebrates, CSPGs are involved also in more specialized processes such as neurogenesis and growth factor signaling. In invertebrates, however, knowledge of CSPGs core proteins and proteoglycan-related functions is relatively limited, even for Caenorhabditis elegans. This nematode produces large amounts of non-sulfated chondroitin in addition to low-sulfated chondroitin sulfate chains. So far, only nine core proteins (CPGs) have been identified, some of which have been shown to be involved in extracellular matrix formation. We recently introduced a protocol to characterize proteoglycan core proteins by identifying CS-glycopeptides with a combination of biochemical enrichment, enzymatic digestion, and nano-scale liquid chromatography MS/MS analysis. Here, we have used this protocol to map the chondroitin glycoproteome in C. elegans, resulting in the identification of 15 novel CPG proteins in addition to the nine previously established. Three of the newly identified CPGs displayed homology to vertebrate proteins. Bioinformatics analysis of the primary protein sequences revealed that the CPG proteins altogether contained 19 unique functional domains, including Kunitz and endostatin domains, suggesting direct involvement in protease inhibition and axonal migration, respectively. The analysis of the core protein domain organization revealed that all chondroitin attachment sites are located in unstructured regions. Our results suggest that CPGs display a much greater functional and structural heterogeneity than previously appreciated and indicate that specialized proteoglycan-mediated functions evolved early in metazoan evolution.


Assuntos
Proteínas de Caenorhabditis elegans/metabolismo , Proteoglicanas de Sulfatos de Condroitina/química , Proteoglicanas de Sulfatos de Condroitina/metabolismo , Sequência de Aminoácidos , Animais , Caenorhabditis elegans/metabolismo , Proteínas de Caenorhabditis elegans/genética , Proteoglicanas de Sulfatos de Condroitina/isolamento & purificação , Sulfatos de Condroitina/metabolismo , Cromatografia em Gel/métodos , Glicopeptídeos/metabolismo , Proteoglicanas/metabolismo , Espectrometria de Massas em Tandem/métodos
13.
Biomaterials ; 134: 13-21, 2017 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-28453954

RESUMO

Traumatic spinal cord injury (SCI) is a devastating event for which functional recovery remains elusive. Due to the complex nature of SCI pathology, a combination treatment strategy will likely be required for success. We hypothesized that tissue and functional repair would be achieved in a rat model of impact-compression SCI by combining degradation of the glial scar, using chondroitinase ABC (ChABC), with recruitment of endogenous neural precursor cells (NPCs), using stromal cell-derived factor 1α (SDF). To test this hypothesis, we designed a crosslinked methylcellulose hydrogel (XMC) for minimally invasive, localized, and sustained intrathecal drug delivery. ChABC was released from XMC using protein-peptide affinity interactions while SDF was delivered by electrostatic affinity interactions from polymeric nanoparticles embedded in XMC. Rats with SCI were treated acutely with a combination of SDF and ChABC, SDF alone, ChABC alone, or vehicle alone, and compared to injury only. Treatment with ChABC, both alone and in combination with SDF, resulted in faster and more sustained behavioural improvement over time than other groups. The significantly reduced chondroitin sulfate proteoglycan levels and greater distribution of NPCs throughout the spinal cord tissue with ChABC delivery, both alone and in combination with SDF, may explain the improved locomotor function. Treatment with SDF alone had no apparent effect on NPC number or distribution nor synergistic effect with ChABC delivery. Thus, in this model of SCI, tissue and functional repair is attributed to ChABC.


Assuntos
Quimiocina CXCL12/química , Condroitina ABC Liase/metabolismo , Traumatismos da Medula Espinal/metabolismo , Animais , Quimiocina CXCL12/metabolismo , Quimiocina CXCL12/uso terapêutico , Condroitina ABC Liase/química , Proteoglicanas de Sulfatos de Condroitina/química , Ensaio de Imunoadsorção Enzimática , Feminino , Hidrogel de Polietilenoglicol-Dimetacrilato/química , Imuno-Histoquímica , Metilcelulose/química , Células-Tronco Neurais/citologia , Células-Tronco Neurais/efeitos dos fármacos , Ratos , Ratos Sprague-Dawley , Traumatismos da Medula Espinal/tratamento farmacológico
14.
Eur J Hum Genet ; 25(2): 200-207, 2017 02.
Artigo em Inglês | MEDLINE | ID: mdl-27876815

RESUMO

Autosomal dominant (AD) familial Meniere's disease (FMD) is a rare disorder involving the inner ear defined by sensorineural hearing loss, tinnitus and episodic vertigo. Here, we have identified two novel and rare heterozygous variants in the SEMA3D and DPT genes segregating with the complete phenotype that have variable expressivity in two pedigrees with AD-FMD. A detailed characterization of the phenotype within each family illustrates the clinical heterogeneity in the onset and progression of the disease. We also showed the expression of both genes in the human cochlea and performed in silico analyses of these variants. Three-dimensional protein modelling showed changes in the structure of the protein indicating potential physical interactions. These results confirm a genetic heterogeneity in FMD with incomplete penetrance and variable expressivity.


Assuntos
Proteoglicanas de Sulfatos de Condroitina/genética , Proteínas da Matriz Extracelular/genética , Heterogeneidade Genética , Doença de Meniere/genética , Penetrância , Semaforinas/genética , Adulto , Idoso , Proteoglicanas de Sulfatos de Condroitina/química , Proteoglicanas de Sulfatos de Condroitina/metabolismo , Cóclea/metabolismo , Proteínas da Matriz Extracelular/química , Proteínas da Matriz Extracelular/metabolismo , Feminino , Genes Dominantes , Humanos , Masculino , Doença de Meniere/diagnóstico , Pessoa de Meia-Idade , Simulação de Dinâmica Molecular , Linhagem , Fenótipo , Semaforinas/química , Semaforinas/metabolismo
15.
J Biol Chem ; 291(51): 26468-26477, 2016 Dec 16.
Artigo em Inglês | MEDLINE | ID: mdl-27803161

RESUMO

Protein acetylation is a prevalent posttranslational modification that is regulated by diverse acetyltransferase enzymes. Although histone acetyltransferases (HATs) have been well characterized both structurally and mechanistically, far less is known about non-histone acetyltransferase enzymes. The human ESCO1 and ESCO2 paralogs acetylate the cohesin complex subunit SMC3 to regulate the separation of sister chromatids during mitosis and meiosis. Missense mutations within the acetyltransferase domain of these proteins correlate with diseases, including endometrial cancers and Roberts syndrome. Despite their biological importance, the mechanisms underlying acetylation by the ESCO proteins are not understood. Here, we report the X-ray crystal structure of the highly conserved zinc finger-acetyltransferase moiety of ESCO1 with accompanying structure-based mutagenesis and biochemical characterization. We find that the ESCO1 acetyltransferase core is structurally homologous to the Gcn5 HAT, but contains unique additional features including a zinc finger and an ∼40-residue loop region that appear to play roles in protein stability and SMC3 substrate binding. We identify key residues that play roles in substrate binding and catalysis, and rationalize the functional consequences of disease-associated mutations. Together, these studies reveal the molecular basis for SMC3 acetylation by ESCO1 and have broader implications for understanding the structure/function of non-histone acetyltransferases.


Assuntos
Acetiltransferases/química , Proteínas de Ciclo Celular/química , Proteínas Cromossômicas não Histona/química , Acetilação , Acetiltransferases/genética , Acetiltransferases/metabolismo , Substituição de Aminoácidos , Proteínas de Ciclo Celular/genética , Proteínas de Ciclo Celular/metabolismo , Proteoglicanas de Sulfatos de Condroitina/química , Proteoglicanas de Sulfatos de Condroitina/genética , Proteoglicanas de Sulfatos de Condroitina/metabolismo , Proteínas Cromossômicas não Histona/genética , Proteínas Cromossômicas não Histona/metabolismo , Cristalografia por Raios X , Humanos , Mutação de Sentido Incorreto , Domínios Proteicos , Homologia Estrutural de Proteína , Relação Estrutura-Atividade , Fatores de Transcrição de p300-CBP/química , Fatores de Transcrição de p300-CBP/genética , Fatores de Transcrição de p300-CBP/metabolismo , Coesinas
16.
Nucleic Acids Res ; 44(13): 6309-17, 2016 07 27.
Artigo em Inglês | MEDLINE | ID: mdl-27307603

RESUMO

The cohesin complex plays an important role in sister chromatin cohesion. Cohesin's core is composed of two structural maintenance of chromosome (SMC) proteins, called Smc1 and Smc3. SMC proteins are built from a globular hinge domain, a rod-shaped domain composed of long anti-parallel coiled-coil (CC), and a second globular adenosine triphosphatase domain called the head. The functions of both head and hinge domains have been studied extensively, yet the function of the CC region remains elusive. We identified a mutation in the CC of smc3 (L217P) that disrupts the function of the protein. Cells carrying the smc3-L217P allele have a strong cohesion defect and complexes containing smc3-L217P are not loaded onto the chromosomes. However, the mutation does not affect inter-protein interactions in either the core complex or with the Scc2 loader. We show by molecular dynamics and biochemistry that wild-type Smc3 can adopt distinct conformations, and that adenosine triphosphate (ATP) induces the conformational change. The L217P mutation restricts the ability of the mutated protein to switch between the conformations. We suggest that the function of the CC is to transfer ATP binding/hydrolysis signals between the head and the hinge domains. The results provide a new insight into the mechanism of cohesin activity.


Assuntos
Proteínas de Ciclo Celular/genética , Proteoglicanas de Sulfatos de Condroitina/genética , Proteínas Cromossômicas não Histona/genética , Neoplasias/genética , Proteínas de Saccharomyces cerevisiae/genética , Trifosfato de Adenosina/genética , Trifosfato de Adenosina/metabolismo , Proteínas de Ciclo Celular/química , Proteoglicanas de Sulfatos de Condroitina/química , Cromatina , Proteínas Cromossômicas não Histona/química , Humanos , Mutação , Neoplasias/química , Conformação Proteica , Domínios Proteicos/genética , Estrutura Terciária de Proteína , Saccharomyces cerevisiae , Proteínas de Saccharomyces cerevisiae/química , Troca de Cromátide Irmã/genética , Coesinas
17.
Nat Commun ; 7: 11312, 2016 04 26.
Artigo em Inglês | MEDLINE | ID: mdl-27115988

RESUMO

Remyelination is the generation of new myelin sheaths after injury facilitated by processes of differentiating oligodendrocyte precursor cells (OPCs). Although this repair phenomenon occurs in lesions of multiple sclerosis patients, many lesions fail to completely remyelinate. A number of factors have been identified that contribute to remyelination failure, including the upregulated chondroitin sulfate proteoglycans (CSPGs) that comprise part of the astrogliotic scar. We show that in vitro, OPCs have dramatically reduced process outgrowth in the presence of CSPGs, and a medication library that includes a number of recently reported OPC differentiation drugs failed to rescue this inhibitory phenotype on CSPGs. We introduce a novel CSPG synthesis inhibitor to reduce CSPG content and find rescued process outgrowth from OPCs in vitro and accelerated remyelination following focal demyelination in mice. Preventing CSPG deposition into the lesion microenvironment may be a useful strategy to promote repair in multiple sclerosis and other neurological disorders.


Assuntos
Sistema Nervoso Central/metabolismo , Proteoglicanas de Sulfatos de Condroitina/biossíntese , Oligodendroglia/metabolismo , Remielinização/fisiologia , Células-Tronco/metabolismo , Animais , Animais Recém-Nascidos , Astrócitos/efeitos dos fármacos , Astrócitos/metabolismo , Sequência de Carboidratos , Células Cultivadas , Sistema Nervoso Central/efeitos dos fármacos , Proteoglicanas de Sulfatos de Condroitina/antagonistas & inibidores , Proteoglicanas de Sulfatos de Condroitina/química , Feminino , Glucosamina/química , Glucosamina/farmacologia , Humanos , Camundongos Endogâmicos C57BL , Estrutura Molecular , Esclerose Múltipla/metabolismo , Esclerose Múltipla/patologia , Oligodendroglia/efeitos dos fármacos , Remielinização/efeitos dos fármacos , Bibliotecas de Moléculas Pequenas/química , Bibliotecas de Moléculas Pequenas/farmacologia , Células-Tronco/efeitos dos fármacos , Açúcares de Uridina Difosfato/química , Açúcares de Uridina Difosfato/farmacologia
18.
Sci Rep ; 6: 19709, 2016 Jan 27.
Artigo em Inglês | MEDLINE | ID: mdl-26815318

RESUMO

With new systemic therapies becoming available for metastatic melanoma such as BRAF and PD-1 inhibitors, there is an increasing demand for methods to assist with treatment selection and response monitoring. Quantification and characterisation of circulating melanoma cells (CMCs) has been regarded as an excellent non-invasive candidate but a sensitive and efficient tool to do these is lacking. Herein we demonstrate a microfluidic approach for melanoma cell capture and subsequent on-chip evaluation of BRAF mutation status. Our approach utilizes a recently discovered alternating current electrohydrodynamic (AC-EHD)-induced surface shear forces, referred to as nanoshearing. A key feature of nanoshearing is the ability to agitate fluid to encourage contact with surface-bound antibody for the cell capture whilst removing nonspecific cells from the surface. By adjusting the AC-EHD force to match the binding affinity of antibodies against the melanoma-associated chondroitin sulphate proteoglycan (MCSP), a commonly expressed melanoma antigen, this platform achieved an average recovery of 84.7% from biological samples. Subsequent staining with anti-BRAF(V600E) specific antibody enabled on-chip evaluation of BRAF(V600E) mutation status in melanoma cells. We believe that the ability of nanoshearing-based capture to enumerate melanoma cells and subsequent on-chip characterisation has the potential as a rapid screening tool while making treatment decisions.


Assuntos
Anticorpos Antineoplásicos/química , Antígenos de Neoplasias/química , Separação Celular , Proteoglicanas de Sulfatos de Condroitina/química , Dispositivos Lab-On-A-Chip , Melanoma/química , Linhagem Celular Tumoral , Separação Celular/instrumentação , Separação Celular/métodos , Humanos , Melanoma/genética , Melanoma/metabolismo , Melanoma/patologia , Mutação , Proteínas Proto-Oncogênicas B-raf/genética , Proteínas Proto-Oncogênicas B-raf/metabolismo
19.
Biomaterials ; 73: 42-50, 2015 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-26398308

RESUMO

The lubricating proteoglycan, lubricin, facilitates the remarkable low friction and wear properties of articular cartilage in the synovial joints of the body. Lubricin lines the joint surfaces and plays a protective role as a boundary lubricant in sliding contact; decreased expression of lubricin is associated with cartilage degradation and the pathogenesis of osteoarthritis. An unmet need for early osteoarthritis treatment is the development of therapeutic molecules that mimic lubricin function and yet are also resistant to enzymatic degradation common in the damaged joint. Here, we engineered a lubricin mimic (mLub) that is less susceptible to enzymatic degradation and binds to the articular surface to reduce friction. mLub was synthesized using a chondroitin sulfate backbone with type II collagen and hyaluronic acid (HA) binding peptides to promote interaction with the articular surface and synovial fluid constituents. In vitro and in vivo characterization confirmed the binding ability of mLub to isolated type II collagen and HA, and to the cartilage surface. Following trypsin treatment to the cartilage surface, application of mLub, in combination with purified or commercially available hyaluronan, reduced the coefficient of friction, and adhesion, to control levels as assessed over macro-to micro-scales by rheometry and atomic force microscopy. In vivo studies demonstrate an mLub residency time of less than 1 week. Enhanced lubrication by mLub reduces surface friction and adhesion, which may suppress the progression of degradation and cartilage loss in the joint. mLub therefore shows potential for treatment in early osteoarthritis following injury.


Assuntos
Materiais Biocompatíveis/química , Cartilagem Articular/metabolismo , Proteoglicanas de Sulfatos de Condroitina/química , Glicoproteínas/química , Líquido Sinovial , Animais , Bovinos , Adesão Celular , Proteoglicanas de Sulfatos de Condroitina/síntese química , Colágeno/química , Colágeno Tipo II/metabolismo , Fricção , Cobaias , Ácido Hialurônico/análogos & derivados , Ácido Hialurônico/química , Ácido Hialurônico/metabolismo , Cinética , Lubrificação , Microscopia de Força Atômica , Modelos Estatísticos , Osteoartrite/metabolismo , Osteoartrite/fisiopatologia , Osteoartrite/terapia , Peptídeos/química , Proteoglicanas/metabolismo , Reologia , Propriedades de Superfície , Tripsina/química
20.
Exp Neurol ; 274(Pt B): 115-25, 2015 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-26315937

RESUMO

Chondroitin sulfate proteoglycans (CSPGs) play important roles in the developing and mature nervous system, where they guide axons, maintain stable connections, restrict synaptic plasticity, and prevent axon regeneration following CNS injury. The chondroitin sulfate glycosaminoglycan (CS GAG) chains that decorate CSPGs are essential for their functions. Through these sugar chains, CSPGs are able to bind and regulate the activity of a diverse range of proteins. CSPGs have been found both to promote and inhibit neuronal growth. They can promote neurite outgrowth by binding to various growth factors such as midkine (MK), pleiotrophin (PTN), brain-derived neurotrophic factor (BDNF) and other neurotrophin family members. CSPGs can also inhibit neuronal growth and limit plasticity by interacting with transmembrane receptors such as protein tyrosine phosphatase σ (PTPσ), leukocyte common antigen-related (LAR) receptor protein tyrosine phosphatase, and the Nogo receptors 1 and 3 (NgR1 and NgR3). These CS-protein interactions depend on specific sulfation patterns within the CS GAG chains, and accordingly, particular CS sulfation motifs are upregulated during development, in the mature nervous system, and in response to CNS injury. Thus, spatiotemporal regulation of CS GAG biosynthesis may provide an important mechanism to control the functions of CSPGs and to modulate intracellular signaling pathways. Here, we will discuss these sulfation-dependent processes and highlight how the CS sugars on CSPGs contribute to neuronal growth, axon guidance, and plasticity in the nervous system.


Assuntos
Sistema Nervoso Central , Proteoglicanas de Sulfatos de Condroitina/fisiologia , Regeneração Nervosa/fisiologia , Plasticidade Neuronal/fisiologia , Animais , Sistema Nervoso Central/citologia , Sistema Nervoso Central/crescimento & desenvolvimento , Sistema Nervoso Central/metabolismo , Proteoglicanas de Sulfatos de Condroitina/química , Humanos
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